Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 FAM58CP-201ENST00000435741 640 ntBASIC19.63■□□□□ 0.73
ATN1P54259 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 HLA-J-203ENST00000494367 1087 ntBASIC19.63■□□□□ 0.73
ATN1P54259 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 PDPK2P-202ENST00000562415 1191 ntBASIC19.63■□□□□ 0.73
ATN1P54259 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 AC008667.4-201ENST00000607370 168 ntBASIC19.63■□□□□ 0.73
ATN1P54259 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 SIRPAP1-201ENST00000448467 1770 ntBASIC19.62■□□□□ 0.73
ATN1P54259 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATN1P54259 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.62■□□□□ 0.73
ATN1P54259 AC096633.1-201ENST00000422446 749 ntBASIC19.62■□□□□ 0.73
ATN1P54259 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.62■□□□□ 0.73
ATN1P54259 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.62■□□□□ 0.73
ATN1P54259 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATN1P54259 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC19.62■□□□□ 0.73
ATN1P54259 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.62■□□□□ 0.73
ATN1P54259 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.62■□□□□ 0.73
ATN1P54259 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.62■□□□□ 0.73
ATN1P54259 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.62■□□□□ 0.73
ATN1P54259 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.62■□□□□ 0.73
ATN1P54259 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.62■□□□□ 0.73
ATN1P54259 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATN1P54259 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.61■□□□□ 0.73
ATN1P54259 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.61■□□□□ 0.73
ATN1P54259 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ATN1P54259 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATN1P54259 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.61■□□□□ 0.73
ATN1P54259 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.61■□□□□ 0.73
ATN1P54259 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATN1P54259 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC19.61■□□□□ 0.73
ATN1P54259 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.61■□□□□ 0.73
ATN1P54259 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.61■□□□□ 0.73
ATN1P54259 AC010507.1-201ENST00000633895 436 ntBASIC19.61■□□□□ 0.73
ATN1P54259 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
ATN1P54259 AC148477.5-201ENST00000625164 1645 ntBASIC19.61■□□□□ 0.73
ATN1P54259 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATN1P54259 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ATN1P54259 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ATN1P54259 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
ATN1P54259 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.6■□□□□ 0.73
ATN1P54259 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ATN1P54259 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.6■□□□□ 0.73
ATN1P54259 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.6■□□□□ 0.73
ATN1P54259 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATN1P54259 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms