Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
EFNA3P52797 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
EFNA3P52797 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.73■□□□□ 0.27
EFNA3P52797 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EFNA3P52797 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.73■□□□□ 0.27
EFNA3P52797 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.73■□□□□ 0.27
EFNA3P52797 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EFNA3P52797 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 NEFHP1-201ENST00000412845 2629 ntBASIC16.72■□□□□ 0.27
EFNA3P52797 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 AC007967.3-201ENST00000434308 558 ntBASIC16.72■□□□□ 0.27
EFNA3P52797 AC132008.2-207ENST00000454517 770 ntBASIC16.72■□□□□ 0.27
EFNA3P52797 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 AL591684.3-201ENST00000605187 298 ntBASIC16.72■□□□□ 0.27
EFNA3P52797 TP73-AS1-207ENST00000624167 988 ntBASIC16.72■□□□□ 0.27
EFNA3P52797 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 AC020763.4-201ENST00000623414 4170 ntBASIC16.72■□□□□ 0.27
EFNA3P52797 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.72■□□□□ 0.27
EFNA3P52797 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EFNA3P52797 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.72■□□□□ 0.27
EFNA3P52797 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.71■□□□□ 0.27
EFNA3P52797 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
EFNA3P52797 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.71■□□□□ 0.27
EFNA3P52797 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
EFNA3P52797 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.71■□□□□ 0.27
EFNA3P52797 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.71■□□□□ 0.27
EFNA3P52797 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.71■□□□□ 0.27
EFNA3P52797 FDX1P1-201ENST00000449115 551 ntBASIC16.71■□□□□ 0.27
EFNA3P52797 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 AC009533.2-201ENST00000543664 586 ntBASIC16.71■□□□□ 0.27
EFNA3P52797 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.71■□□□□ 0.27
EFNA3P52797 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.71■□□□□ 0.27
EFNA3P52797 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.71■□□□□ 0.27
EFNA3P52797 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.71■□□□□ 0.27
EFNA3P52797 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 AP001269.4-201ENST00000609611 512 ntBASIC16.71■□□□□ 0.27
EFNA3P52797 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.71■□□□□ 0.27
EFNA3P52797 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.71■□□□□ 0.27
EFNA3P52797 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EFNA3P52797 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
EFNA3P52797 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.71■□□□□ 0.27
EFNA3P52797 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.71■□□□□ 0.27
EFNA3P52797 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.71■□□□□ 0.27
EFNA3P52797 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
EFNA3P52797 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.7■□□□□ 0.26
EFNA3P52797 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms