Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.77■□□□□ 0.28
SMSP52788 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMSP52788 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
SMSP52788 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMSP52788 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.77■□□□□ 0.28
SMSP52788 FAAHP1-202ENST00000446499 1238 ntBASIC16.77■□□□□ 0.28
SMSP52788 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.77■□□□□ 0.28
SMSP52788 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMSP52788 RN7SL510P-201ENST00000581311 263 ntBASIC16.77■□□□□ 0.28
SMSP52788 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMSP52788 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMSP52788 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMSP52788 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMSP52788 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
SMSP52788 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SMSP52788 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMSP52788 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMSP52788 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.77■□□□□ 0.27
SMSP52788 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.77■□□□□ 0.27
SMSP52788 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SMSP52788 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.76■□□□□ 0.27
SMSP52788 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SMSP52788 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SMSP52788 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SMSP52788 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.76■□□□□ 0.27
SMSP52788 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.76■□□□□ 0.27
SMSP52788 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.76■□□□□ 0.27
SMSP52788 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.76■□□□□ 0.27
SMSP52788 MIR4674-201ENST00000582457 87 ntBASIC16.76■□□□□ 0.27
SMSP52788 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SMSP52788 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SMSP52788 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
SMSP52788 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.76■□□□□ 0.27
SMSP52788 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.76■□□□□ 0.27
SMSP52788 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMSP52788 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.75■□□□□ 0.27
SMSP52788 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SMSP52788 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.75■□□□□ 0.27
SMSP52788 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.75■□□□□ 0.27
SMSP52788 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.75■□□□□ 0.27
SMSP52788 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.75■□□□□ 0.27
SMSP52788 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.75■□□□□ 0.27
SMSP52788 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SMSP52788 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.75■□□□□ 0.27
SMSP52788 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.75■□□□□ 0.27
SMSP52788 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.75■□□□□ 0.27
SMSP52788 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.75■□□□□ 0.27
SMSP52788 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SMSP52788 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.75■□□□□ 0.27
SMSP52788 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.75■□□□□ 0.27
SMSP52788 AL109659.2-201ENST00000606809 1674 ntBASIC16.75■□□□□ 0.27
SMSP52788 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMSP52788 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms