Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 SIRPAP1-201ENST00000448467 1770 ntBASIC19.6■□□□□ 0.73
CLCN3P51790 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLCN3P51790 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 RPS2P1-201ENST00000434010 821 ntBASIC19.59■□□□□ 0.73
CLCN3P51790 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCN3P51790 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCN3P51790 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CLCN3P51790 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.59■□□□□ 0.73
CLCN3P51790 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN3P51790 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN3P51790 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CLCN3P51790 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCN3P51790 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.58■□□□□ 0.73
CLCN3P51790 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.58■□□□□ 0.73
CLCN3P51790 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.58■□□□□ 0.73
CLCN3P51790 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.58■□□□□ 0.73
CLCN3P51790 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLCN3P51790 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLCN3P51790 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCN3P51790 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLCN3P51790 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.58■□□□□ 0.72
CLCN3P51790 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCN3P51790 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 AC025062.2-201ENST00000605477 670 ntBASIC19.58■□□□□ 0.72
CLCN3P51790 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLCN3P51790 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLCN3P51790 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN3P51790 AC009949.1-201ENST00000623048 1830 ntBASIC19.58■□□□□ 0.72
CLCN3P51790 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLCN3P51790 PMPCAP1-201ENST00000508114 1576 ntBASIC19.57■□□□□ 0.72
CLCN3P51790 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLCN3P51790 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 AL020996.1-203ENST00000536896 2307 ntBASIC19.57■□□□□ 0.72
CLCN3P51790 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLCN3P51790 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CLCN3P51790 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLCN3P51790 COX5BP2-201ENST00000392354 334 ntBASIC19.57■□□□□ 0.72
CLCN3P51790 BX005266.1-201ENST00000473402 457 ntBASIC19.57■□□□□ 0.72
CLCN3P51790 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.57■□□□□ 0.72
CLCN3P51790 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.57■□□□□ 0.72
CLCN3P51790 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLCN3P51790 AL139288.1-201ENST00000623748 933 ntBASIC19.57■□□□□ 0.72
CLCN3P51790 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN3P51790 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms