Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
GPC3P51654 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
GPC3P51654 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.72■□□□□ 0.75
GPC3P51654 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC3P51654 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
GPC3P51654 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC3P51654 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.71■□□□□ 0.75
GPC3P51654 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC3P51654 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
GPC3P51654 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.71■□□□□ 0.75
GPC3P51654 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.71■□□□□ 0.75
GPC3P51654 AP001269.4-201ENST00000609611 512 ntBASIC19.71■□□□□ 0.75
GPC3P51654 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.71■□□□□ 0.75
GPC3P51654 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 NOC2LP1-202ENST00000452600 2235 ntBASIC19.71■□□□□ 0.75
GPC3P51654 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GPC3P51654 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GPC3P51654 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC3P51654 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC3P51654 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 AL096828.2-201ENST00000567259 1965 ntBASIC19.7■□□□□ 0.74
GPC3P51654 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC3P51654 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC3P51654 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC3P51654 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC3P51654 AL355877.3-201ENST00000622820 899 ntBASIC19.7■□□□□ 0.74
GPC3P51654 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
GPC3P51654 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC3P51654 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC3P51654 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GPC3P51654 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC3P51654 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC3P51654 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GPC3P51654 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC3P51654 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC3P51654 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GPC3P51654 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
GPC3P51654 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
GPC3P51654 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC3P51654 FAM197Y8-203ENST00000450145 560 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms