Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.76□□□□□ -0.05
SNCAP37840 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 PCDHB19P-201ENST00000570871 2371 ntBASIC14.76□□□□□ -0.05
SNCAP37840 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SNCAP37840 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SNCAP37840 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SNCAP37840 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.75□□□□□ -0.05
SNCAP37840 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.75□□□□□ -0.05
SNCAP37840 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.75□□□□□ -0.05
SNCAP37840 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SNCAP37840 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.75□□□□□ -0.05
SNCAP37840 AC130371.2-201ENST00000619443 611 ntBASIC14.75□□□□□ -0.05
SNCAP37840 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.75□□□□□ -0.05
SNCAP37840 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SNCAP37840 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNCAP37840 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
SNCAP37840 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 AL109659.2-201ENST00000606809 1674 ntBASIC14.74□□□□□ -0.05
SNCAP37840 AL356309.3-201ENST00000624132 1934 ntBASIC14.74□□□□□ -0.05
SNCAP37840 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.74□□□□□ -0.05
SNCAP37840 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SNCAP37840 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 AL513477.1-201ENST00000602865 2407 ntBASIC14.74□□□□□ -0.05
SNCAP37840 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SNCAP37840 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SNCAP37840 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.74□□□□□ -0.05
SNCAP37840 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.74□□□□□ -0.05
SNCAP37840 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 AC128676.1-201ENST00000454392 318 ntBASIC14.74□□□□□ -0.05
SNCAP37840 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.74□□□□□ -0.05
SNCAP37840 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.74□□□□□ -0.05
SNCAP37840 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.74□□□□□ -0.05
SNCAP37840 RARRES2P10-201ENST00000564312 460 ntBASIC14.74□□□□□ -0.05
SNCAP37840 AF186192.3-201ENST00000583427 947 ntBASIC14.74□□□□□ -0.05
SNCAP37840 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.74□□□□□ -0.05
SNCAP37840 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 FSCN1P1-201ENST00000568912 1481 ntBASIC14.74□□□□□ -0.05
SNCAP37840 AL596257.1-201ENST00000641463 2694 ntBASIC14.74□□□□□ -0.05
SNCAP37840 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNCAP37840 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SNCAP37840 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms