Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
EPHA3P29320 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHA3P29320 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EPHA3P29320 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
EPHA3P29320 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.41■□□□□ 0.38
EPHA3P29320 AL353719.1-201ENST00000566847 864 ntBASIC17.41■□□□□ 0.38
EPHA3P29320 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.41■□□□□ 0.38
EPHA3P29320 AP005242.2-201ENST00000580065 1175 ntBASIC17.41■□□□□ 0.38
EPHA3P29320 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHA3P29320 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHA3P29320 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EPHA3P29320 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHA3P29320 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EPHA3P29320 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA3P29320 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EPHA3P29320 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPHA3P29320 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHA3P29320 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA3P29320 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.4■□□□□ 0.38
EPHA3P29320 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHA3P29320 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHA3P29320 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 AC113410.3-201ENST00000623366 203 ntBASIC17.4■□□□□ 0.38
EPHA3P29320 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPHA3P29320 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA3P29320 HLA-J-201ENST00000462773 1622 ntBASIC17.39■□□□□ 0.38
EPHA3P29320 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
EPHA3P29320 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
EPHA3P29320 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
EPHA3P29320 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.39■□□□□ 0.38
EPHA3P29320 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.39■□□□□ 0.37
EPHA3P29320 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA3P29320 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
EPHA3P29320 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 ABHD17AP1-201ENST00000358206 933 ntBASIC17.39■□□□□ 0.37
EPHA3P29320 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA3P29320 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA3P29320 RPS2P55-201ENST00000397318 883 ntBASIC17.39■□□□□ 0.37
EPHA3P29320 SLC25A1P2-201ENST00000430693 912 ntBASIC17.39■□□□□ 0.37
EPHA3P29320 TSPY17P-201ENST00000450329 467 ntBASIC17.39■□□□□ 0.37
EPHA3P29320 AC107956.1-201ENST00000494359 873 ntBASIC17.39■□□□□ 0.37
EPHA3P29320 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.39■□□□□ 0.37
EPHA3P29320 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.39■□□□□ 0.37
EPHA3P29320 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA3P29320 AC010240.3-201ENST00000607688 395 ntBASIC17.39■□□□□ 0.37
EPHA3P29320 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EPHA3P29320 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
EPHA3P29320 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA3P29320 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
EPHA3P29320 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
EPHA3P29320 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA3P29320 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
EPHA3P29320 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms