Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AP006288.1-201ENST00000446065 395 ntBASIC20.56■□□□□ 0.88
CAPN2P17655 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CAPN2P17655 AC113404.2-201ENST00000507884 177 ntBASIC20.56■□□□□ 0.88
CAPN2P17655 RNA5SP416-201ENST00000516838 111 ntBASIC20.56■□□□□ 0.88
CAPN2P17655 AC002347.1-201ENST00000569543 541 ntBASIC20.56■□□□□ 0.88
CAPN2P17655 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN2P17655 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN2P17655 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CAPN2P17655 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CAPN2P17655 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CAPN2P17655 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CAPN2P17655 AL390961.4-201ENST00000623958 2535 ntBASIC20.56■□□□□ 0.88
CAPN2P17655 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN2P17655 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN2P17655 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN2P17655 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.55■□□□□ 0.88
CAPN2P17655 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CAPN2P17655 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.55■□□□□ 0.88
CAPN2P17655 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 RCN1P2-201ENST00000398357 915 ntBASIC20.55■□□□□ 0.88
CAPN2P17655 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN2P17655 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.55■□□□□ 0.88
CAPN2P17655 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN2P17655 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN2P17655 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CAPN2P17655 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.55■□□□□ 0.88
CAPN2P17655 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CAPN2P17655 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 AC134684.3-201ENST00000641758 218 ntBASIC20.55■□□□□ 0.88
CAPN2P17655 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CAPN2P17655 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CAPN2P17655 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CAPN2P17655 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN2P17655 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN2P17655 TREX1-205ENST00000625293 1783 ntBASIC20.54■□□□□ 0.88
CAPN2P17655 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN2P17655 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPN2P17655 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CAPN2P17655 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPN2P17655 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPN2P17655 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN2P17655 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CAPN2P17655 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 TP73-AS1-210ENST00000637775 1455 ntBASIC20.54■□□□□ 0.88
CAPN2P17655 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN2P17655 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN2P17655 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN2P17655 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN2P17655 AC112777.1-201ENST00000540175 1423 ntBASIC20.53■□□□□ 0.88
CAPN2P17655 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN2P17655 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN2P17655 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN2P17655 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN2P17655 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN2P17655 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN2P17655 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CAPN2P17655 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms