Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT13P13646 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.58■□□□□ 0.73
KRT13P13646 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KRT13P13646 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT13P13646 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.58■□□□□ 0.72
KRT13P13646 AC009154.2-201ENST00000621177 724 ntBASIC19.58■□□□□ 0.72
KRT13P13646 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
KRT13P13646 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT13P13646 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
KRT13P13646 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.57■□□□□ 0.72
KRT13P13646 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 AC005332.3-201ENST00000589904 676 ntBASIC19.57■□□□□ 0.72
KRT13P13646 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
KRT13P13646 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.57■□□□□ 0.72
KRT13P13646 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT13P13646 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.57■□□□□ 0.72
KRT13P13646 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT13P13646 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT13P13646 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 AC134043.2-201ENST00000624206 2238 ntBASIC19.56■□□□□ 0.72
KRT13P13646 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 AL645929.1-201ENST00000420084 975 ntBASIC19.56■□□□□ 0.72
KRT13P13646 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT13P13646 SPDYE13P-201ENST00000445314 798 ntBASIC19.56■□□□□ 0.72
KRT13P13646 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.56■□□□□ 0.72
KRT13P13646 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KRT13P13646 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT13P13646 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KRT13P13646 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT13P13646 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT13P13646 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.56■□□□□ 0.72
KRT13P13646 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
KRT13P13646 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT13P13646 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT13P13646 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT13P13646 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT13P13646 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT13P13646 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT13P13646 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT13P13646 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT13P13646 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms