Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.18□□□□□ -0.14
PF4V1P10720 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.18□□□□□ -0.14
PF4V1P10720 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PF4V1P10720 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PF4V1P10720 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.18□□□□□ -0.14
PF4V1P10720 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.18□□□□□ -0.14
PF4V1P10720 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.18□□□□□ -0.14
PF4V1P10720 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.18□□□□□ -0.14
PF4V1P10720 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PF4V1P10720 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.18□□□□□ -0.14
PF4V1P10720 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.18□□□□□ -0.14
PF4V1P10720 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.18□□□□□ -0.14
PF4V1P10720 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 LINC00602-201ENST00000629776 2065 ntBASIC14.18□□□□□ -0.14
PF4V1P10720 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PF4V1P10720 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.17□□□□□ -0.14
PF4V1P10720 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.17□□□□□ -0.14
PF4V1P10720 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 AC099336.1-202ENST00000602961 463 ntBASIC14.17□□□□□ -0.14
PF4V1P10720 AL732292.2-201ENST00000609649 430 ntBASIC14.17□□□□□ -0.14
PF4V1P10720 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.17□□□□□ -0.14
PF4V1P10720 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 AC009113.1-201ENST00000570267 2443 ntBASIC14.17□□□□□ -0.14
PF4V1P10720 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PF4V1P10720 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.17□□□□□ -0.14
PF4V1P10720 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.17□□□□□ -0.14
PF4V1P10720 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.17□□□□□ -0.14
PF4V1P10720 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PF4V1P10720 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.16□□□□□ -0.14
PF4V1P10720 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 LINC00167-201ENST00000530583 1419 ntBASIC14.16□□□□□ -0.14
PF4V1P10720 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
PF4V1P10720 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PF4V1P10720 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms