Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.08■□□□□ 0.64
FAM228BP0C875 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
FAM228BP0C875 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.08■□□□□ 0.64
FAM228BP0C875 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.08■□□□□ 0.64
FAM228BP0C875 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.08■□□□□ 0.64
FAM228BP0C875 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FAM228BP0C875 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
FAM228BP0C875 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.07■□□□□ 0.64
FAM228BP0C875 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
FAM228BP0C875 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
FAM228BP0C875 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.07■□□□□ 0.64
FAM228BP0C875 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 KRT18P65-201ENST00000439811 1286 ntBASIC19.07■□□□□ 0.64
FAM228BP0C875 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.07■□□□□ 0.64
FAM228BP0C875 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.07■□□□□ 0.64
FAM228BP0C875 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
FAM228BP0C875 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.07■□□□□ 0.64
FAM228BP0C875 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 KRT89P-201ENST00000620027 1478 ntBASIC19.07■□□□□ 0.64
FAM228BP0C875 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.07■□□□□ 0.64
FAM228BP0C875 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.07■□□□□ 0.64
FAM228BP0C875 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
FAM228BP0C875 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.07■□□□□ 0.64
FAM228BP0C875 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
FAM228BP0C875 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FAM228BP0C875 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.06■□□□□ 0.64
FAM228BP0C875 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.06■□□□□ 0.64
FAM228BP0C875 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 AD000864.1-201ENST00000624076 2295 ntBASIC19.06■□□□□ 0.64
FAM228BP0C875 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.06■□□□□ 0.64
FAM228BP0C875 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.06■□□□□ 0.64
FAM228BP0C875 RASA4DP-201ENST00000460726 1199 ntBASIC19.06■□□□□ 0.64
FAM228BP0C875 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.06■□□□□ 0.64
FAM228BP0C875 AC145285.6-201ENST00000604632 637 ntBASIC19.06■□□□□ 0.64
FAM228BP0C875 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.06■□□□□ 0.64
FAM228BP0C875 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.06■□□□□ 0.64
FAM228BP0C875 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.06■□□□□ 0.64
FAM228BP0C875 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FAM228BP0C875 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.05■□□□□ 0.64
FAM228BP0C875 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
FAM228BP0C875 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
FAM228BP0C875 AL391807.1-203ENST00000604392 2365 ntBASIC19.05■□□□□ 0.64
FAM228BP0C875 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
FAM228BP0C875 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.05■□□□□ 0.64
FAM228BP0C875 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.05■□□□□ 0.64
FAM228BP0C875 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 AC034232.1-201ENST00000506026 1064 ntBASIC19.05■□□□□ 0.64
FAM228BP0C875 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 AC116407.2-201ENST00000613639 860 ntBASIC19.05■□□□□ 0.64
FAM228BP0C875 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.05■□□□□ 0.64
FAM228BP0C875 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
FAM228BP0C875 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
FAM228BP0C875 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
FAM228BP0C875 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FAM228BP0C875 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms