Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CSF1RP07333 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CSF1RP07333 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.91■■□□□ 1.1
CSF1RP07333 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSF1RP07333 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CSF1RP07333 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CSF1RP07333 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.9■■□□□ 1.1
CSF1RP07333 BICD1-207ENST00000551848 1962 ntBASIC21.9■■□□□ 1.1
CSF1RP07333 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.9■■□□□ 1.1
CSF1RP07333 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.9■■□□□ 1.1
CSF1RP07333 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CSF1RP07333 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CSF1RP07333 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.9■■□□□ 1.1
CSF1RP07333 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.9■■□□□ 1.1
CSF1RP07333 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.9■■□□□ 1.1
CSF1RP07333 KRT18P58-201ENST00000527480 1120 ntBASIC21.9■■□□□ 1.1
CSF1RP07333 AC109462.3-201ENST00000573934 613 ntBASIC21.9■■□□□ 1.1
CSF1RP07333 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.9■■□□□ 1.1
CSF1RP07333 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.9■■□□□ 1.1
CSF1RP07333 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CSF1RP07333 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.9■■□□□ 1.1
CSF1RP07333 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSF1RP07333 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
CSF1RP07333 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CSF1RP07333 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.89■■□□□ 1.09
CSF1RP07333 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.89■■□□□ 1.09
CSF1RP07333 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.89■■□□□ 1.09
CSF1RP07333 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.89■■□□□ 1.09
CSF1RP07333 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.89■■□□□ 1.09
CSF1RP07333 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CSF1RP07333 RNA5SP415-201ENST00000517246 115 ntBASIC21.89■■□□□ 1.09
CSF1RP07333 STK25P1-201ENST00000585406 838 ntBASIC21.89■■□□□ 1.09
CSF1RP07333 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
CSF1RP07333 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.89■■□□□ 1.09
CSF1RP07333 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.89■■□□□ 1.09
CSF1RP07333 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.89■■□□□ 1.09
CSF1RP07333 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.89■■□□□ 1.09
CSF1RP07333 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CSF1RP07333 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CSF1RP07333 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSF1RP07333 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
CSF1RP07333 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.88■■□□□ 1.09
CSF1RP07333 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CSF1RP07333 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSF1RP07333 AC104109.2-201ENST00000602919 1418 ntBASIC21.88■■□□□ 1.09
CSF1RP07333 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.88■■□□□ 1.09
CSF1RP07333 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.88■■□□□ 1.09
CSF1RP07333 ZNF259P1-201ENST00000407656 1365 ntBASIC21.87■■□□□ 1.09
CSF1RP07333 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 AC120498.9-201ENST00000339021 3867 ntBASIC21.87■■□□□ 1.09
CSF1RP07333 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.87■■□□□ 1.09
CSF1RP07333 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.87■■□□□ 1.09
CSF1RP07333 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.87■■□□□ 1.09
CSF1RP07333 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.87■■□□□ 1.09
CSF1RP07333 AL589182.2-201ENST00000619332 1049 ntBASIC21.87■■□□□ 1.09
CSF1RP07333 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.87■■□□□ 1.09
CSF1RP07333 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.87■■□□□ 1.09
CSF1RP07333 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CSF1RP07333 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSF1RP07333 AC138028.4-201ENST00000564984 1845 ntBASIC21.87■■□□□ 1.09
CSF1RP07333 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.87■■□□□ 1.09
CSF1RP07333 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CSF1RP07333 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms