Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM3P06753 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM3P06753 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.09■□□□□ 0.81
TPM3P06753 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TPM3P06753 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM3P06753 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TPM3P06753 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM3P06753 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM3P06753 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM3P06753 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM3P06753 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM3P06753 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.08■□□□□ 0.81
TPM3P06753 GPAT2P1-201ENST00000444924 1672 ntBASIC20.08■□□□□ 0.81
TPM3P06753 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM3P06753 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.08■□□□□ 0.81
TPM3P06753 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.08■□□□□ 0.81
TPM3P06753 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM3P06753 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.08■□□□□ 0.8
TPM3P06753 SDHAP2-201ENST00000455183 2001 ntBASIC20.08■□□□□ 0.8
TPM3P06753 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM3P06753 AC093010.1-201ENST00000473625 1624 ntBASIC20.08■□□□□ 0.8
TPM3P06753 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.08■□□□□ 0.8
TPM3P06753 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM3P06753 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.08■□□□□ 0.8
TPM3P06753 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TPM3P06753 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.08■□□□□ 0.8
TPM3P06753 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.08■□□□□ 0.8
TPM3P06753 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TPM3P06753 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM3P06753 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TPM3P06753 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.07■□□□□ 0.8
TPM3P06753 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TPM3P06753 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM3P06753 FSCN1P1-201ENST00000568912 1481 ntBASIC20.07■□□□□ 0.8
TPM3P06753 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.07■□□□□ 0.8
TPM3P06753 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 B3GAT3P1-201ENST00000471720 806 ntBASIC20.07■□□□□ 0.8
TPM3P06753 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM3P06753 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.07■□□□□ 0.8
TPM3P06753 AC073195.1-201ENST00000607241 877 ntBASIC20.07■□□□□ 0.8
TPM3P06753 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM3P06753 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TPM3P06753 PCDHB19P-201ENST00000570871 2371 ntBASIC20.07■□□□□ 0.8
TPM3P06753 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TPM3P06753 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TPM3P06753 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TPM3P06753 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM3P06753 MIR3180-5-201ENST00000583743 153 ntBASIC20.06■□□□□ 0.8
TPM3P06753 AP000692.2-201ENST00000608391 879 ntBASIC20.06■□□□□ 0.8
TPM3P06753 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TPM3P06753 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TPM3P06753 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM3P06753 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM3P06753 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TPM3P06753 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
TPM3P06753 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TPM3P06753 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TPM3P06753 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TPM3P06753 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.05■□□□□ 0.8
TPM3P06753 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 AC011506.1-201ENST00000474329 610 ntBASIC20.05■□□□□ 0.8
TPM3P06753 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.05■□□□□ 0.8
TPM3P06753 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms