Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC132938.5-201ENST00000624980 1813 ntBASIC18.82■□□□□ 0.6
RB1P06400 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.82■□□□□ 0.6
RB1P06400 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 AC003669.1-201ENST00000334569 611 ntBASIC18.82■□□□□ 0.6
RB1P06400 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 MIR770-201ENST00000390219 98 ntBASIC18.82■□□□□ 0.6
RB1P06400 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.82■□□□□ 0.6
RB1P06400 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.82■□□□□ 0.6
RB1P06400 AC096734.2-201ENST00000562054 433 ntBASIC18.82■□□□□ 0.6
RB1P06400 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.82■□□□□ 0.6
RB1P06400 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RB1P06400 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.82■□□□□ 0.6
RB1P06400 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.82■□□□□ 0.6
RB1P06400 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.82■□□□□ 0.6
RB1P06400 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.82■□□□□ 0.6
RB1P06400 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RB1P06400 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.81■□□□□ 0.6
RB1P06400 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.81■□□□□ 0.6
RB1P06400 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.81■□□□□ 0.6
RB1P06400 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 MRPL20P1-201ENST00000400819 433 ntBASIC18.81■□□□□ 0.6
RB1P06400 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.81■□□□□ 0.6
RB1P06400 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.81■□□□□ 0.6
RB1P06400 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 PDPK2P-202ENST00000562415 1191 ntBASIC18.81■□□□□ 0.6
RB1P06400 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.81■□□□□ 0.6
RB1P06400 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.81■□□□□ 0.6
RB1P06400 AL805961.1-202ENST00000641562 540 ntBASIC18.81■□□□□ 0.6
RB1P06400 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RB1P06400 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.81■□□□□ 0.6
RB1P06400 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RB1P06400 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RB1P06400 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RB1P06400 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RB1P06400 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.8■□□□□ 0.6
RB1P06400 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.8■□□□□ 0.6
RB1P06400 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
RB1P06400 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.8■□□□□ 0.6
RB1P06400 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.8■□□□□ 0.6
RB1P06400 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RB1P06400 AC011467.4-201ENST00000594891 528 ntBASIC18.8■□□□□ 0.6
RB1P06400 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
RB1P06400 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.8■□□□□ 0.6
RB1P06400 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.8■□□□□ 0.6
RB1P06400 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RB1P06400 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.8■□□□□ 0.6
RB1P06400 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RB1P06400 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RB1P06400 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 ESPNP-201ENST00000270691 2015 ntBASIC18.79■□□□□ 0.6
RB1P06400 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.79■□□□□ 0.6
RB1P06400 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RB1P06400 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RB1P06400 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RB1P06400 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RB1P06400 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.79■□□□□ 0.6
RB1P06400 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RB1P06400 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.79■□□□□ 0.6
RB1P06400 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.79■□□□□ 0.6
RB1P06400 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RB1P06400 KLF4P1-201ENST00000412782 1185 ntBASIC18.79■□□□□ 0.6
RB1P06400 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RB1P06400 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.79■□□□□ 0.6
RB1P06400 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.79■□□□□ 0.6
RB1P06400 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RB1P06400 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms