Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.32■□□□□ 0.2
P04436 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
P04436 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.32■□□□□ 0.2
P04436 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.32■□□□□ 0.2
P04436 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.32■□□□□ 0.2
P04436 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.32■□□□□ 0.2
P04436 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.32■□□□□ 0.2
P04436 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.32■□□□□ 0.2
P04436 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.32■□□□□ 0.2
P04436 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.32■□□□□ 0.2
P04436 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.32■□□□□ 0.2
P04436 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.32■□□□□ 0.2
P04436 AC011467.2-201ENST00000598425 242 ntBASIC16.32■□□□□ 0.2
P04436 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.32■□□□□ 0.2
P04436 AC116407.2-201ENST00000613639 860 ntBASIC16.32■□□□□ 0.2
P04436 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.32■□□□□ 0.2
P04436 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
P04436 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.32■□□□□ 0.2
P04436 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
P04436 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
P04436 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
P04436 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
P04436 REXO1L9P-201ENST00000604264 2108 ntBASIC16.31■□□□□ 0.2
P04436 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.31■□□□□ 0.2
P04436 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.31■□□□□ 0.2
P04436 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.31■□□□□ 0.2
P04436 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
P04436 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.31■□□□□ 0.2
P04436 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 AC097374.2-201ENST00000618617 1306 ntBASIC16.31■□□□□ 0.2
P04436 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.31■□□□□ 0.2
P04436 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.31■□□□□ 0.2
P04436 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.31■□□□□ 0.2
P04436 REXO1L6P-202ENST00000619970 1078 ntBASIC16.31■□□□□ 0.2
P04436 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
P04436 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
P04436 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
P04436 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04436 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
P04436 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.3■□□□□ 0.2
P04436 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.3■□□□□ 0.2
P04436 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
P04436 INTS4P1-201ENST00000438455 1935 ntBASIC16.3■□□□□ 0.2
P04436 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.3■□□□□ 0.2
P04436 FAM220CP-201ENST00000395253 831 ntBASIC16.3■□□□□ 0.2
P04436 AC132008.2-207ENST00000454517 770 ntBASIC16.3■□□□□ 0.2
P04436 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.3■□□□□ 0.2
P04436 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.3■□□□□ 0.2
P04436 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.3■□□□□ 0.2
P04436 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.3■□□□□ 0.2
P04436 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.3■□□□□ 0.2
P04436 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.3■□□□□ 0.2
P04436 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.3■□□□□ 0.2
P04436 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
P04436 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
P04436 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
P04436 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04436 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
P04436 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms