Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC090164.3-201ENST00000610780 2143 ntBASIC19.55■□□□□ 0.72
VTNP04004 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
VTNP04004 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.55■□□□□ 0.72
VTNP04004 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.55■□□□□ 0.72
VTNP04004 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.54■□□□□ 0.72
VTNP04004 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.54■□□□□ 0.72
VTNP04004 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VTNP04004 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.54■□□□□ 0.72
VTNP04004 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.54■□□□□ 0.72
VTNP04004 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.54■□□□□ 0.72
VTNP04004 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.54■□□□□ 0.72
VTNP04004 BX005266.1-201ENST00000473402 457 ntBASIC19.54■□□□□ 0.72
VTNP04004 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.54■□□□□ 0.72
VTNP04004 MTDHP4-201ENST00000600287 670 ntBASIC19.54■□□□□ 0.72
VTNP04004 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
VTNP04004 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 AP000997.3-201ENST00000623333 2250 ntBASIC19.54■□□□□ 0.72
VTNP04004 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
VTNP04004 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 AC004817.3-201ENST00000602957 2129 ntBASIC19.54■□□□□ 0.72
VTNP04004 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTNP04004 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VTNP04004 PMPCAP1-201ENST00000508114 1576 ntBASIC19.53■□□□□ 0.72
VTNP04004 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.53■□□□□ 0.72
VTNP04004 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.53■□□□□ 0.72
VTNP04004 AC009113.1-201ENST00000570267 2443 ntBASIC19.53■□□□□ 0.72
VTNP04004 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.53■□□□□ 0.72
VTNP04004 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.53■□□□□ 0.72
VTNP04004 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 COX5BP2-201ENST00000392354 334 ntBASIC19.53■□□□□ 0.72
VTNP04004 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.53■□□□□ 0.72
VTNP04004 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.53■□□□□ 0.72
VTNP04004 AC012640.2-201ENST00000561606 901 ntBASIC19.53■□□□□ 0.72
VTNP04004 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.53■□□□□ 0.72
VTNP04004 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.53■□□□□ 0.72
VTNP04004 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VTNP04004 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.53■□□□□ 0.72
VTNP04004 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTNP04004 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
VTNP04004 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTNP04004 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTNP04004 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTNP04004 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTNP04004 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTNP04004 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTNP04004 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTNP04004 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.52■□□□□ 0.72
VTNP04004 RPS2P28-201ENST00000314255 741 ntBASIC19.52■□□□□ 0.72
VTNP04004 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.52■□□□□ 0.72
VTNP04004 MIR574-201ENST00000385209 96 ntBASIC19.52■□□□□ 0.72
VTNP04004 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.52■□□□□ 0.72
VTNP04004 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.52■□□□□ 0.72
VTNP04004 OR7E14P-202ENST00000530490 1290 ntBASIC19.52■□□□□ 0.72
VTNP04004 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.52■□□□□ 0.72
VTNP04004 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VTNP04004 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 AD001527.2-201ENST00000622994 785 ntBASIC19.52■□□□□ 0.72
VTNP04004 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
VTNP04004 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
VTNP04004 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VTNP04004 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.52■□□□□ 0.71
VTNP04004 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.52■□□□□ 0.71
VTNP04004 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.51■□□□□ 0.71
VTNP04004 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.51■□□□□ 0.71
VTNP04004 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.51■□□□□ 0.71
VTNP04004 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
VTNP04004 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms