Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.54■□□□□ 0.56
IFNB1P01574 AL645608.8-201ENST00000606034 2086 ntBASIC18.54■□□□□ 0.56
IFNB1P01574 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IFNB1P01574 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFNB1P01574 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFNB1P01574 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFNB1P01574 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
IFNB1P01574 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFNB1P01574 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFNB1P01574 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
IFNB1P01574 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 AC141586.5-201ENST00000624546 2050 ntBASIC18.53■□□□□ 0.56
IFNB1P01574 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
IFNB1P01574 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.53■□□□□ 0.56
IFNB1P01574 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.53■□□□□ 0.56
IFNB1P01574 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 NEK4P2-201ENST00000580004 1012 ntBASIC18.53■□□□□ 0.56
IFNB1P01574 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
IFNB1P01574 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.53■□□□□ 0.56
IFNB1P01574 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
IFNB1P01574 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
IFNB1P01574 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.53■□□□□ 0.56
IFNB1P01574 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.53■□□□□ 0.56
IFNB1P01574 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNB1P01574 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNB1P01574 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
IFNB1P01574 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
IFNB1P01574 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
IFNB1P01574 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.52■□□□□ 0.56
IFNB1P01574 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.52■□□□□ 0.56
IFNB1P01574 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
IFNB1P01574 AL157888.1-201ENST00000631930 593 ntBASIC18.52■□□□□ 0.56
IFNB1P01574 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.52■□□□□ 0.56
IFNB1P01574 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
IFNB1P01574 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
IFNB1P01574 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNB1P01574 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
IFNB1P01574 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.55
IFNB1P01574 LINC01568-207ENST00000641790 1380 ntBASIC18.52■□□□□ 0.55
IFNB1P01574 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
IFNB1P01574 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 LINC00602-201ENST00000629776 2065 ntBASIC18.51■□□□□ 0.55
IFNB1P01574 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.51■□□□□ 0.55
IFNB1P01574 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.51■□□□□ 0.55
IFNB1P01574 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IFNB1P01574 AC108860.2-201ENST00000562760 2183 ntBASIC18.51■□□□□ 0.55
IFNB1P01574 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.51■□□□□ 0.55
IFNB1P01574 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.51■□□□□ 0.55
IFNB1P01574 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
IFNB1P01574 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.51■□□□□ 0.55
IFNB1P01574 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.51■□□□□ 0.55
IFNB1P01574 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.51■□□□□ 0.55
IFNB1P01574 AC008687.5-201ENST00000593746 558 ntBASIC18.51■□□□□ 0.55
IFNB1P01574 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
IFNB1P01574 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
IFNB1P01574 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.51■□□□□ 0.55
IFNB1P01574 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNB1P01574 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
IFNB1P01574 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.51■□□□□ 0.55
IFNB1P01574 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IFNB1P01574 CROCCP1-201ENST00000426910 5675 ntBASIC18.51■□□□□ 0.55
IFNB1P01574 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.51■□□□□ 0.55
IFNB1P01574 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
IFNB1P01574 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms