Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15□□□□□ -0.01
SIX6O95475 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SIX6O95475 AC093010.1-201ENST00000473625 1624 ntBASIC14.99□□□□□ -0.01
SIX6O95475 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.99□□□□□ -0.01
SIX6O95475 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.99□□□□□ -0.01
SIX6O95475 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.99□□□□□ -0.01
SIX6O95475 AC007322.1-201ENST00000426983 750 ntBASIC14.99□□□□□ -0.01
SIX6O95475 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
SIX6O95475 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.99□□□□□ -0.01
SIX6O95475 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SIX6O95475 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
SIX6O95475 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.99□□□□□ -0.01
SIX6O95475 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.99□□□□□ -0.01
SIX6O95475 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIX6O95475 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 AL139246.5-201ENST00000606645 996 ntBASIC14.98□□□□□ -0.01
SIX6O95475 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.98□□□□□ -0.01
SIX6O95475 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SIX6O95475 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIX6O95475 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 AC026691.1-201ENST00000602502 2017 ntBASIC14.97□□□□□ -0.01
SIX6O95475 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
SIX6O95475 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
SIX6O95475 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.97□□□□□ -0.01
SIX6O95475 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.97□□□□□ -0.01
SIX6O95475 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms