Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18■□□□□ 0.47
VAPBO95292 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VAPBO95292 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
VAPBO95292 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VAPBO95292 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VAPBO95292 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VAPBO95292 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
VAPBO95292 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18■□□□□ 0.47
VAPBO95292 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18■□□□□ 0.47
VAPBO95292 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
VAPBO95292 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.99■□□□□ 0.47
VAPBO95292 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 RNF152P1-201ENST00000397754 604 ntBASIC17.99■□□□□ 0.47
VAPBO95292 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 FAM8A6P-201ENST00000407496 1135 ntBASIC17.99■□□□□ 0.47
VAPBO95292 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.99■□□□□ 0.47
VAPBO95292 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.99■□□□□ 0.47
VAPBO95292 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.99■□□□□ 0.47
VAPBO95292 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.99■□□□□ 0.47
VAPBO95292 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.99■□□□□ 0.47
VAPBO95292 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VAPBO95292 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
VAPBO95292 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VAPBO95292 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
VAPBO95292 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 KRT18P48-201ENST00000434763 852 ntBASIC17.98■□□□□ 0.47
VAPBO95292 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.98■□□□□ 0.47
VAPBO95292 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 AC006011.2-201ENST00000621313 1158 ntBASIC17.98■□□□□ 0.47
VAPBO95292 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 AL355312.1-201ENST00000407115 2176 ntBASIC17.98■□□□□ 0.47
VAPBO95292 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.98■□□□□ 0.47
VAPBO95292 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VAPBO95292 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VAPBO95292 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.97■□□□□ 0.47
VAPBO95292 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VAPBO95292 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
VAPBO95292 AK4P3-201ENST00000418260 669 ntBASIC17.97■□□□□ 0.47
VAPBO95292 KRT18P38-201ENST00000449496 1282 ntBASIC17.97■□□□□ 0.47
VAPBO95292 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.97■□□□□ 0.47
VAPBO95292 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.97■□□□□ 0.47
VAPBO95292 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.97■□□□□ 0.47
VAPBO95292 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
VAPBO95292 AC004263.2-201ENST00000617183 678 ntBASIC17.97■□□□□ 0.47
VAPBO95292 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.97■□□□□ 0.47
VAPBO95292 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VAPBO95292 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.97■□□□□ 0.47
VAPBO95292 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms