Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT3O75175 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT3O75175 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNOT3O75175 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT3O75175 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT3O75175 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT3O75175 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.36■□□□□ 0.37
CNOT3O75175 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CNOT3O75175 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 BX276092.5-203ENST00000456199 560 ntBASIC17.36■□□□□ 0.37
CNOT3O75175 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.36■□□□□ 0.37
CNOT3O75175 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.36■□□□□ 0.37
CNOT3O75175 MIR3180-4-201ENST00000582223 153 ntBASIC17.36■□□□□ 0.37
CNOT3O75175 AL121894.2-201ENST00000602977 491 ntBASIC17.36■□□□□ 0.37
CNOT3O75175 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT3O75175 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT3O75175 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT3O75175 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT3O75175 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 AL356309.3-201ENST00000624132 1934 ntBASIC17.35■□□□□ 0.37
CNOT3O75175 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.35■□□□□ 0.37
CNOT3O75175 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
CNOT3O75175 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 KRT8P26-201ENST00000534154 1276 ntBASIC17.35■□□□□ 0.37
CNOT3O75175 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.35■□□□□ 0.37
CNOT3O75175 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNOT3O75175 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.35■□□□□ 0.37
CNOT3O75175 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CNOT3O75175 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CNOT3O75175 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CNOT3O75175 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT3O75175 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CNOT3O75175 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT3O75175 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
CNOT3O75175 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT3O75175 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms