Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
SCN2BO60939 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.98■□□□□ 0.31
SCN2BO60939 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.98■□□□□ 0.31
SCN2BO60939 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 AC141257.4-201ENST00000634557 245 ntBASIC16.98■□□□□ 0.31
SCN2BO60939 AC136944.6-201ENST00000634818 245 ntBASIC16.98■□□□□ 0.31
SCN2BO60939 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.98■□□□□ 0.31
SCN2BO60939 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.98■□□□□ 0.31
SCN2BO60939 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SCN2BO60939 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SCN2BO60939 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 LINC00304-203ENST00000565008 1864 ntBASIC16.97■□□□□ 0.31
SCN2BO60939 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN2BO60939 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 AC080080.1-201ENST00000625121 2420 ntBASIC16.97■□□□□ 0.31
SCN2BO60939 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN2BO60939 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 AL596275.1-201ENST00000423464 877 ntBASIC16.97■□□□□ 0.31
SCN2BO60939 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN2BO60939 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN2BO60939 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.97■□□□□ 0.31
SCN2BO60939 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SCN2BO60939 LINC01568-207ENST00000641790 1380 ntBASIC16.97■□□□□ 0.31
SCN2BO60939 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SCN2BO60939 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN2BO60939 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SCN2BO60939 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SCN2BO60939 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.96■□□□□ 0.31
SCN2BO60939 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.96■□□□□ 0.31
SCN2BO60939 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 GCSHP2-201ENST00000560971 527 ntBASIC16.96■□□□□ 0.31
SCN2BO60939 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.96■□□□□ 0.31
SCN2BO60939 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
SCN2BO60939 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN2BO60939 AC066615.1-201ENST00000640911 628 ntBASIC16.96■□□□□ 0.31
SCN2BO60939 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.96■□□□□ 0.31
SCN2BO60939 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.96■□□□□ 0.31
SCN2BO60939 AL138688.1-201ENST00000624851 1594 ntBASIC16.96■□□□□ 0.31
SCN2BO60939 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms