Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH7O60245 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH7O60245 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH7O60245 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDH7O60245 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH7O60245 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDH7O60245 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDH7O60245 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH7O60245 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDH7O60245 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDH7O60245 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH7O60245 RNF152P1-201ENST00000397754 604 ntBASIC17.1■□□□□ 0.33
PCDH7O60245 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH7O60245 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
PCDH7O60245 AC006011.2-201ENST00000621313 1158 ntBASIC17.1■□□□□ 0.33
PCDH7O60245 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH7O60245 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH7O60245 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH7O60245 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH7O60245 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH7O60245 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH7O60245 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH7O60245 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PCDH7O60245 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 TSPY5P-201ENST00000426936 936 ntBASIC17.09■□□□□ 0.33
PCDH7O60245 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDH7O60245 HOMER2P1-201ENST00000455653 964 ntBASIC17.09■□□□□ 0.33
PCDH7O60245 AL359075.1-203ENST00000462729 1002 ntBASIC17.09■□□□□ 0.33
PCDH7O60245 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDH7O60245 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 AC004263.2-201ENST00000617183 678 ntBASIC17.09■□□□□ 0.33
PCDH7O60245 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH7O60245 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDH7O60245 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDH7O60245 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH7O60245 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDH7O60245 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH7O60245 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH7O60245 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH7O60245 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PCDH7O60245 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDH7O60245 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH7O60245 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDH7O60245 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH7O60245 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PCDH7O60245 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH7O60245 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH7O60245 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 AK4P3-201ENST00000418260 669 ntBASIC17.08■□□□□ 0.32
PCDH7O60245 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH7O60245 KRT18P38-201ENST00000449496 1282 ntBASIC17.08■□□□□ 0.32
PCDH7O60245 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH7O60245 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH7O60245 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH7O60245 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH7O60245 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH7O60245 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH7O60245 AC116407.2-201ENST00000613639 860 ntBASIC17.08■□□□□ 0.32
PCDH7O60245 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms