Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 GPX1P2-201ENST00000429271 606 ntBASIC19.06■□□□□ 0.64
HOXA2O43364 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA2O43364 AC007967.2-201ENST00000432613 625 ntBASIC19.06■□□□□ 0.64
HOXA2O43364 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
HOXA2O43364 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXA2O43364 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.06■□□□□ 0.64
HOXA2O43364 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.06■□□□□ 0.64
HOXA2O43364 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.06■□□□□ 0.64
HOXA2O43364 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXA2O43364 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.06■□□□□ 0.64
HOXA2O43364 AC079781.4-201ENST00000641908 219 ntBASIC19.06■□□□□ 0.64
HOXA2O43364 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA2O43364 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA2O43364 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA2O43364 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXA2O43364 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA2O43364 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXA2O43364 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HOXA2O43364 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HOXA2O43364 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXA2O43364 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HOXA2O43364 KLF4P1-201ENST00000412782 1185 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
HOXA2O43364 SIGLEC30P-201ENST00000455569 941 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.05■□□□□ 0.64
HOXA2O43364 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 AC010327.4-202ENST00000591484 748 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 AC004817.3-201ENST00000602957 2129 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 AC004706.3-202ENST00000621574 984 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXA2O43364 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 NCF1C-201ENST00000438382 1427 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXA2O43364 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 AL049757.1-201ENST00000616842 1596 ntBASIC19.05■□□□□ 0.64
HOXA2O43364 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXA2O43364 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXA2O43364 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXA2O43364 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 SIRPAP1-201ENST00000448467 1770 ntBASIC19.04■□□□□ 0.64
HOXA2O43364 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HOXA2O43364 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
HOXA2O43364 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HOXA2O43364 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXA2O43364 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXA2O43364 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXA2O43364 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXA2O43364 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA2O43364 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXA2O43364 AL139424.1-201ENST00000607572 797 ntBASIC19.04■□□□□ 0.64
HOXA2O43364 AC064836.3-201ENST00000607928 673 ntBASIC19.04■□□□□ 0.64
HOXA2O43364 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HOXA2O43364 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXA2O43364 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXA2O43364 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HOXA2O43364 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HOXA2O43364 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.03■□□□□ 0.64
HOXA2O43364 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 MTDHP5-201ENST00000598980 586 ntBASIC19.03■□□□□ 0.64
HOXA2O43364 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXA2O43364 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXA2O43364 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXA2O43364 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HOXA2O43364 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.02■□□□□ 0.64
HOXA2O43364 AC132938.5-201ENST00000624980 1813 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms