Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RIPK2O43353 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.17■□□□□ 0.5
RIPK2O43353 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.17■□□□□ 0.5
RIPK2O43353 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.16■□□□□ 0.5
RIPK2O43353 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.16■□□□□ 0.5
RIPK2O43353 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.16■□□□□ 0.5
RIPK2O43353 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.16■□□□□ 0.5
RIPK2O43353 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.16■□□□□ 0.5
RIPK2O43353 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RIPK2O43353 AC010240.3-201ENST00000607688 395 ntBASIC18.16■□□□□ 0.5
RIPK2O43353 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.16■□□□□ 0.5
RIPK2O43353 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RIPK2O43353 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RIPK2O43353 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
RIPK2O43353 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RIPK2O43353 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RIPK2O43353 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.16■□□□□ 0.5
RIPK2O43353 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RIPK2O43353 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RIPK2O43353 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RIPK2O43353 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RIPK2O43353 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RIPK2O43353 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.15■□□□□ 0.5
RIPK2O43353 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.15■□□□□ 0.5
RIPK2O43353 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.15■□□□□ 0.5
RIPK2O43353 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
RIPK2O43353 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.15■□□□□ 0.5
RIPK2O43353 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RIPK2O43353 PCDHA14-201ENST00000506751 2298 ntBASIC18.15■□□□□ 0.5
RIPK2O43353 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.15■□□□□ 0.5
RIPK2O43353 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.15■□□□□ 0.5
RIPK2O43353 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.15■□□□□ 0.5
RIPK2O43353 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.15■□□□□ 0.5
RIPK2O43353 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.15■□□□□ 0.5
RIPK2O43353 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RIPK2O43353 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RIPK2O43353 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RIPK2O43353 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.14■□□□□ 0.5
RIPK2O43353 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RIPK2O43353 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RIPK2O43353 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.14■□□□□ 0.5
RIPK2O43353 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RIPK2O43353 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RIPK2O43353 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.14■□□□□ 0.49
RIPK2O43353 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
RIPK2O43353 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
RIPK2O43353 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.14■□□□□ 0.49
RIPK2O43353 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.14■□□□□ 0.49
RIPK2O43353 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.14■□□□□ 0.49
RIPK2O43353 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.14■□□□□ 0.49
RIPK2O43353 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.14■□□□□ 0.49
RIPK2O43353 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RIPK2O43353 AC060834.1-201ENST00000443027 2032 ntBASIC18.14■□□□□ 0.49
RIPK2O43353 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.14■□□□□ 0.49
RIPK2O43353 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RIPK2O43353 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
RIPK2O43353 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.14■□□□□ 0.49
RIPK2O43353 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.14■□□□□ 0.49
RIPK2O43353 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RIPK2O43353 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RIPK2O43353 AL135905.2-201ENST00000584934 1404 ntBASIC18.14■□□□□ 0.49
RIPK2O43353 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms