Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP9YO00507 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP9YO00507 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP9YO00507 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.33■□□□□ 0.05
USP9YO00507 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
USP9YO00507 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP9YO00507 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP9YO00507 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
USP9YO00507 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
USP9YO00507 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.33■□□□□ 0.04
USP9YO00507 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 AC122714.2-201ENST00000502787 707 ntBASIC15.33■□□□□ 0.04
USP9YO00507 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.33■□□□□ 0.04
USP9YO00507 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.33■□□□□ 0.04
USP9YO00507 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 AC006116.8-202ENST00000587620 1550 ntBASIC15.33■□□□□ 0.04
USP9YO00507 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 FO538757.1-201ENST00000623083 1397 ntBASIC15.33■□□□□ 0.04
USP9YO00507 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9YO00507 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP9YO00507 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
USP9YO00507 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
USP9YO00507 AL592309.1-201ENST00000443127 649 ntBASIC15.32■□□□□ 0.04
USP9YO00507 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.32■□□□□ 0.04
USP9YO00507 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
USP9YO00507 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
USP9YO00507 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
USP9YO00507 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.32■□□□□ 0.04
USP9YO00507 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.32■□□□□ 0.04
USP9YO00507 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.32■□□□□ 0.04
USP9YO00507 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.32■□□□□ 0.04
USP9YO00507 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.32■□□□□ 0.04
USP9YO00507 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.32■□□□□ 0.04
USP9YO00507 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.32■□□□□ 0.04
USP9YO00507 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 AC132938.5-201ENST00000624980 1813 ntBASIC15.32■□□□□ 0.04
USP9YO00507 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
USP9YO00507 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9YO00507 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9YO00507 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9YO00507 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
USP9YO00507 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
USP9YO00507 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.31■□□□□ 0.04
USP9YO00507 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
USP9YO00507 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9YO00507 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 MRPS18AP1-201ENST00000414458 589 ntBASIC15.31■□□□□ 0.04
USP9YO00507 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9YO00507 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9YO00507 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9YO00507 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9YO00507 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9YO00507 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
USP9YO00507 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9YO00507 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9YO00507 GPS2P2-201ENST00000430745 888 ntBASIC15.31■□□□□ 0.04
USP9YO00507 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.31■□□□□ 0.04
USP9YO00507 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9YO00507 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9YO00507 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.3■□□□□ 0.04
USP9YO00507 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
USP9YO00507 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
USP9YO00507 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
USP9YO00507 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9YO00507 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9YO00507 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms