Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AP000593.1-201ENST00000393668 712 ntBASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 KRT18P41-201ENST00000518924 1277 ntBASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AF213884.3-201ENST00000563833 479 ntBASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AL121906.2-201ENST00000621597 723 ntBASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SBF1P1-201ENST00000444527 5631 ntBASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 RER1-204ENST00000378518 522 ntTSL 3 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AL160286.2-201ENST00000567150 934 ntBASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AC069236.1-201ENST00000604339 616 ntBASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AC106739.1-201ENST00000617035 715 ntBASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AL035685.1-201ENST00000636663 812 ntBASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TMEM256-PLSCR3K7ERE1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms