Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC010460.3-201ENST00000511359 1579 ntBASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC090164.3-201ENST00000610780 2143 ntBASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC087289.5-201ENST00000586076 3175 ntBASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.88■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 RPS2P28-201ENST00000314255 741 ntBASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AL031284.1-201ENST00000419297 478 ntBASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 RNPS1P1-201ENST00000507437 918 ntBASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AL139288.1-201ENST00000623748 933 ntBASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AL356309.3-201ENST00000624132 1934 ntBASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC103564.2-201ENST00000432853 1299 ntBASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC018712.1-201ENST00000455767 687 ntBASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.86■□□□□ 0.45
C1QTNF3-AMACRE9PGA6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms