Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 TSPY22P-201ENST00000427496 604 ntBASIC17.86■□□□□ 0.45
CFAP99D6REC4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 DUTP2-201ENST00000519164 463 ntBASIC17.86■□□□□ 0.45
CFAP99D6REC4 RNF126P1-202ENST00000569893 925 ntBASIC17.86■□□□□ 0.45
CFAP99D6REC4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 AC091076.1-201ENST00000610741 619 ntBASIC17.86■□□□□ 0.45
CFAP99D6REC4 AC009154.2-201ENST00000621177 724 ntBASIC17.86■□□□□ 0.45
CFAP99D6REC4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.86■□□□□ 0.45
CFAP99D6REC4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP99D6REC4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 NIFKP4-201ENST00000567275 1192 ntBASIC17.85■□□□□ 0.45
CFAP99D6REC4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 AP000550.4-202ENST00000639755 178 ntBASIC17.85■□□□□ 0.45
CFAP99D6REC4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CFAP99D6REC4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CFAP99D6REC4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 AC138028.4-201ENST00000564984 1845 ntBASIC17.84■□□□□ 0.45
CFAP99D6REC4 AC132938.6-201ENST00000623828 1655 ntBASIC17.84■□□□□ 0.45
CFAP99D6REC4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 BX276092.5-203ENST00000456199 560 ntBASIC17.84■□□□□ 0.45
CFAP99D6REC4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 GUSBP12-201ENST00000513727 720 ntBASIC17.84■□□□□ 0.45
CFAP99D6REC4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 KRT8P26-201ENST00000534154 1276 ntBASIC17.84■□□□□ 0.45
CFAP99D6REC4 AL121672.3-201ENST00000608644 468 ntBASIC17.84■□□□□ 0.45
CFAP99D6REC4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 AC116407.4-201ENST00000623319 1061 ntBASIC17.84■□□□□ 0.45
CFAP99D6REC4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CFAP99D6REC4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.84■□□□□ 0.45
CFAP99D6REC4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms