Protein–RNA interactions for Protein: B8ZZ34

SHISA8, Putative protein shisa-8, humanhuman

Predictions only

Length 492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8B8ZZ34 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.23■□□□□ 0.19
SHISA8B8ZZ34 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA8B8ZZ34 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA8B8ZZ34 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA8B8ZZ34 AC233702.3-201ENST00000578656 1387 ntBASIC16.23■□□□□ 0.19
SHISA8B8ZZ34 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 AC090340.1-201ENST00000620778 4980 ntBASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 AC074051.2-201ENST00000565115 352 ntBASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 AC012313.10-201ENST00000623509 926 ntBASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.22■□□□□ 0.19
SHISA8B8ZZ34 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 AC012317.2-201ENST00000623305 2251 ntBASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 AC005336.2-201ENST00000593183 939 ntBASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA8B8ZZ34 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SHISA8B8ZZ34 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SHISA8B8ZZ34 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
SHISA8B8ZZ34 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHISA8B8ZZ34 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 KRT18P56-201ENST00000507275 550 ntBASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SHISA8B8ZZ34 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms