Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.42□□□□□ -0.1
SRRM4A7MD48 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.42□□□□□ -0.1
SRRM4A7MD48 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.42□□□□□ -0.1
SRRM4A7MD48 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SRRM4A7MD48 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.42□□□□□ -0.1
SRRM4A7MD48 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SRRM4A7MD48 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.42□□□□□ -0.1
SRRM4A7MD48 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SRRM4A7MD48 AC141586.5-201ENST00000624546 2050 ntBASIC14.42□□□□□ -0.1
SRRM4A7MD48 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 KRT18P57-201ENST00000443599 1254 ntBASIC14.41□□□□□ -0.1
SRRM4A7MD48 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRRM4A7MD48 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.41□□□□□ -0.1
SRRM4A7MD48 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 TSPY5P-201ENST00000426936 936 ntBASIC14.4□□□□□ -0.1
SRRM4A7MD48 KRT18P48-201ENST00000434763 852 ntBASIC14.4□□□□□ -0.1
SRRM4A7MD48 KRT18P65-201ENST00000439811 1286 ntBASIC14.4□□□□□ -0.1
SRRM4A7MD48 KRT18P38-201ENST00000449496 1282 ntBASIC14.4□□□□□ -0.1
SRRM4A7MD48 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 AC004263.2-201ENST00000617183 678 ntBASIC14.4□□□□□ -0.1
SRRM4A7MD48 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 AC009949.1-201ENST00000623048 1830 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms