Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN8A6NHC0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.15■□□□□ 0.5
CAPN8A6NHC0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 AL121672.3-201ENST00000608644 468 ntBASIC18.15■□□□□ 0.5
CAPN8A6NHC0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN8A6NHC0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN8A6NHC0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN8A6NHC0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 BX276092.5-203ENST00000456199 560 ntBASIC18.14■□□□□ 0.49
CAPN8A6NHC0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN8A6NHC0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 AC009053.2-201ENST00000563701 2365 ntBASIC18.13■□□□□ 0.49
CAPN8A6NHC0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CAPN8A6NHC0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.12■□□□□ 0.49
CAPN8A6NHC0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN8A6NHC0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN8A6NHC0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN8A6NHC0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN8A6NHC0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms