Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC187A0A096LP49 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
CCDC187A0A096LP49 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
CCDC187A0A096LP49 AC010460.3-201ENST00000511359 1579 ntBASIC16.89■□□□□ 0.3
CCDC187A0A096LP49 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC187A0A096LP49 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC187A0A096LP49 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC187A0A096LP49 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 AC005082.1-201ENST00000413042 2259 ntBASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 AC211486.1-202ENST00000416371 468 ntBASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 AC211476.1-201ENST00000503899 468 ntBASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 AL589182.2-201ENST00000619332 1049 ntBASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC187A0A096LP49 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 DNAJB3-202ENST00000449667 1266 ntBASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 AC027796.2-201ENST00000575326 344 ntBASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 AC073592.5-201ENST00000624854 528 ntBASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC187A0A096LP49 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AC138932.1-201ENST00000534164 6830 ntBASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AC022898.2-201ENST00000616822 1312 ntBASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AC004817.3-201ENST00000602957 2129 ntBASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC187A0A096LP49 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms