Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 AC140113.3-201ENST00000605663 199 ntBASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB3Q9Y5G1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 AC091076.1-201ENST00000610741 619 ntBASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 AC011558.1-201ENST00000623459 338 ntBASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB3Q9Y5G1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB3Q9Y5G1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGB3Q9Y5G1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms