Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RTCBQ9Y3I0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 KLF4P1-201ENST00000412782 1185 ntBASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.45■■□□□ 1.18
RTCBQ9Y3I0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 MRPL20P1-201ENST00000400819 433 ntBASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 AC096734.2-201ENST00000562054 433 ntBASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTCBQ9Y3I0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 BCAR1-209ENST00000546196 1340 ntBASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 AC093028.1-201ENST00000622998 982 ntBASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 AC010507.1-201ENST00000633895 436 ntBASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 AL805961.1-202ENST00000641562 540 ntBASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTCBQ9Y3I0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 AC093010.1-201ENST00000473625 1624 ntBASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 AC003669.1-201ENST00000334569 611 ntBASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 TSEN15P1-201ENST00000423257 515 ntBASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 KRT19P2-202ENST00000557173 1012 ntBASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTCBQ9Y3I0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms