Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9Y3F1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q9Y3F1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9Y3F1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9Y3F1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.69■□□□□ 0.74
Q9Y3F1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.69■□□□□ 0.74
Q9Y3F1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.69■□□□□ 0.74
Q9Y3F1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.69■□□□□ 0.74
Q9Y3F1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.69■□□□□ 0.74
Q9Y3F1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.69■□□□□ 0.74
Q9Y3F1 STK25P1-201ENST00000585406 838 ntBASIC19.69■□□□□ 0.74
Q9Y3F1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9Y3F1 AL096828.2-201ENST00000567259 1965 ntBASIC19.69■□□□□ 0.74
Q9Y3F1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q9Y3F1 BX276092.7-203ENST00000637198 1536 ntBASIC19.69■□□□□ 0.74
Q9Y3F1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Q9Y3F1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.68■□□□□ 0.74
Q9Y3F1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Q9Y3F1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.68■□□□□ 0.74
Q9Y3F1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.68■□□□□ 0.74
Q9Y3F1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Q9Y3F1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.68■□□□□ 0.74
Q9Y3F1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.68■□□□□ 0.74
Q9Y3F1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.68■□□□□ 0.74
Q9Y3F1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.68■□□□□ 0.74
Q9Y3F1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.68■□□□□ 0.74
Q9Y3F1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 AL805961.1-202ENST00000641562 540 ntBASIC19.68■□□□□ 0.74
Q9Y3F1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Q9Y3F1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.68■□□□□ 0.74
Q9Y3F1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9Y3F1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Q9Y3F1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Q9Y3F1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.67■□□□□ 0.74
Q9Y3F1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
Q9Y3F1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.67■□□□□ 0.74
Q9Y3F1 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.67■□□□□ 0.74
Q9Y3F1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.67■□□□□ 0.74
Q9Y3F1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.67■□□□□ 0.74
Q9Y3F1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.67■□□□□ 0.74
Q9Y3F1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 AC109462.3-201ENST00000573934 613 ntBASIC19.67■□□□□ 0.74
Q9Y3F1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 C20orf181-201ENST00000623918 480 ntBASIC19.67■□□□□ 0.74
Q9Y3F1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Q9Y3F1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.67■□□□□ 0.74
Q9Y3F1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.67■□□□□ 0.74
Q9Y3F1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Q9Y3F1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9Y3F1 GPR89P-201ENST00000407924 1495 ntBASIC19.67■□□□□ 0.74
Q9Y3F1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q9Y3F1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.66■□□□□ 0.74
Q9Y3F1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9Y3F1 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.66■□□□□ 0.74
Q9Y3F1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Q9Y3F1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9Y3F1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9Y3F1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q9Y3F1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9Y3F1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.66■□□□□ 0.74
Q9Y3F1 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.66■□□□□ 0.74
Q9Y3F1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Q9Y3F1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.66■□□□□ 0.74
Q9Y3F1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.66■□□□□ 0.74
Q9Y3F1 STK19B-204ENST00000512515 211 ntBASIC19.66■□□□□ 0.74
Q9Y3F1 IGHV3-52-201ENST00000519770 353 ntBASIC19.66■□□□□ 0.74
Q9Y3F1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Q9Y3F1 AC027796.2-201ENST00000575326 344 ntBASIC19.66■□□□□ 0.74
Q9Y3F1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.66■□□□□ 0.74
Q9Y3F1 MIR4751-201ENST00000578027 74 ntBASIC19.66■□□□□ 0.74
Q9Y3F1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.66■□□□□ 0.74
Q9Y3F1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.66■□□□□ 0.74
Q9Y3F1 AL355385.1-201ENST00000606123 409 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms