Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF6Q9Y252 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.89■□□□□ 0.3
RNF6Q9Y252 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF6Q9Y252 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RNF6Q9Y252 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.89■□□□□ 0.3
RNF6Q9Y252 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF6Q9Y252 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF6Q9Y252 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF6Q9Y252 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 GCSHP2-201ENST00000560971 527 ntBASIC16.88■□□□□ 0.29
RNF6Q9Y252 AL136038.3-201ENST00000561909 1096 ntBASIC16.88■□□□□ 0.29
RNF6Q9Y252 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 AC141586.5-201ENST00000624546 2050 ntBASIC16.88■□□□□ 0.29
RNF6Q9Y252 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF6Q9Y252 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF6Q9Y252 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 HCG4P8-203ENST00000443049 980 ntBASIC16.87■□□□□ 0.29
RNF6Q9Y252 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 ZNF444P1-201ENST00000559497 298 ntBASIC16.87■□□□□ 0.29
RNF6Q9Y252 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 AC069148.1-201ENST00000608741 768 ntBASIC16.87■□□□□ 0.29
RNF6Q9Y252 AC083849.1-201ENST00000615227 514 ntBASIC16.87■□□□□ 0.29
RNF6Q9Y252 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF6Q9Y252 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF6Q9Y252 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms