Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 FAM197Y8-203ENST00000450145 560 ntBASIC17.54■□□□□ 0.4
SATB2Q9UPW6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 AC009065.1-201ENST00000564055 1225 ntBASIC17.54■□□□□ 0.4
SATB2Q9UPW6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.54■□□□□ 0.4
SATB2Q9UPW6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SATB2Q9UPW6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 MIR574-201ENST00000385209 96 ntBASIC17.53■□□□□ 0.4
SATB2Q9UPW6 KRT18P13-201ENST00000400056 1290 ntBASIC17.53■□□□□ 0.4
SATB2Q9UPW6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 AC139530.3-201ENST00000620344 690 ntBASIC17.53■□□□□ 0.4
SATB2Q9UPW6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SATB2Q9UPW6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 NFIC-211ENST00000641145 8399 ntBASIC17.52■□□□□ 0.4
SATB2Q9UPW6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 RNA5SP419-201ENST00000515908 135 ntBASIC17.52■□□□□ 0.4
SATB2Q9UPW6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SATB2Q9UPW6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SATB2Q9UPW6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SATB2Q9UPW6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SATB2Q9UPW6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SATB2Q9UPW6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SATB2Q9UPW6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.52■□□□□ 0.39
SATB2Q9UPW6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SATB2Q9UPW6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SATB2Q9UPW6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SATB2Q9UPW6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SATB2Q9UPW6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SATB2Q9UPW6 KRT89P-201ENST00000620027 1478 ntBASIC17.51■□□□□ 0.39
SATB2Q9UPW6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.51■□□□□ 0.39
SATB2Q9UPW6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SATB2Q9UPW6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms