Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 NUS1P2-201ENST00000417358 873 ntBASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA1Q9UND3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 AC091607.1-201ENST00000490318 1060 ntBASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 AL353801.3-201ENST00000609898 542 ntBASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NPIPA1Q9UND3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
NPIPA1Q9UND3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ABALON-201ENST00000629058 1903 ntBASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms