Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 AL512604.3-201ENST00000569583 964 ntBASIC20.54■□□□□ 0.88
USP25Q9UHP3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 AL139384.1-201ENST00000612143 3047 ntBASIC20.53■□□□□ 0.88
USP25Q9UHP3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP25Q9UHP3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
USP25Q9UHP3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
USP25Q9UHP3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
USP25Q9UHP3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.52■□□□□ 0.88
USP25Q9UHP3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
USP25Q9UHP3 AC010240.3-201ENST00000607688 395 ntBASIC20.52■□□□□ 0.88
USP25Q9UHP3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.52■□□□□ 0.88
USP25Q9UHP3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP25Q9UHP3 LINC01126-201ENST00000623515 1646 ntBASIC20.52■□□□□ 0.88
USP25Q9UHP3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.52■□□□□ 0.87
USP25Q9UHP3 UBALD1-205ENST00000590891 2641 ntBASIC20.52■□□□□ 0.87
USP25Q9UHP3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP25Q9UHP3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
USP25Q9UHP3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.52■□□□□ 0.87
USP25Q9UHP3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.52■□□□□ 0.87
USP25Q9UHP3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 AC099343.3-201ENST00000605834 2503 ntBASIC20.51■□□□□ 0.87
USP25Q9UHP3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 NAPSB-206ENST00000562112 1266 ntBASIC20.51■□□□□ 0.87
USP25Q9UHP3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 AL024508.2-201ENST00000607749 1894 ntBASIC20.51■□□□□ 0.87
USP25Q9UHP3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
USP25Q9UHP3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP25Q9UHP3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms