Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AL121761.2-201ENST00000598007 1648 ntBASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AC099398.1-201ENST00000567919 2776 ntBASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 SLC25A3P1-201ENST00000443844 931 ntBASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 MIR3180-4-201ENST00000582223 153 ntBASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTI1BQ9UEU0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 AL512604.3-201ENST00000569583 964 ntBASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 AL024508.2-201ENST00000607749 1894 ntBASIC17.61■□□□□ 0.41
VTI1BQ9UEU0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 AC113347.1-201ENST00000413321 391 ntBASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 MIR4674-201ENST00000582457 87 ntBASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VTI1BQ9UEU0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms