Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL096828.2-201ENST00000567259 1965 ntBASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPARGC1AQ9UBK2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 AL121672.3-201ENST00000608644 468 ntBASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 AC132938.6-201ENST00000623828 1655 ntBASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 LINC00602-201ENST00000629776 2065 ntBASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPARGC1AQ9UBK2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.64■□□□□ 0.58
PPARGC1AQ9UBK2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PPARGC1AQ9UBK2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.64■□□□□ 0.58
PPARGC1AQ9UBK2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 BX276092.5-203ENST00000456199 560 ntBASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 DUTP2-201ENST00000519164 463 ntBASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PPARGC1AQ9UBK2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 KRT18P65-201ENST00000439811 1286 ntBASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PPARGC1AQ9UBK2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms