Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AP001269.4-201ENST00000609611 512 ntBASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 AL355877.3-201ENST00000622820 899 ntBASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCF1Q9UBD9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 AC135776.1-201ENST00000319817 2481 ntBASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 FAM220CP-201ENST00000395253 831 ntBASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 MRPL3P1-201ENST00000400109 1033 ntBASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCF1Q9UBD9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 ABCD1P5-201ENST00000445663 754 ntBASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 FGFR3P6-201ENST00000457012 610 ntBASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCF1Q9UBD9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCF1Q9UBD9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms