Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 ACTG1P14-201ENST00000446382 1122 ntBASIC18.84■□□□□ 0.61
CHD7Q9P2D1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 AC025580.3-201ENST00000617932 1424 ntBASIC18.83■□□□□ 0.61
CHD7Q9P2D1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 AC008667.4-201ENST00000607370 168 ntBASIC18.83■□□□□ 0.61
CHD7Q9P2D1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.83■□□□□ 0.61
CHD7Q9P2D1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHD7Q9P2D1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AC069262.1-201ENST00000539058 672 ntBASIC18.82■□□□□ 0.6
CHD7Q9P2D1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 GK-202ENST00000378941 458 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AC122714.2-201ENST00000502787 707 ntBASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AP005018.1-201ENST00000525475 301 ntBASIC18.82■□□□□ 0.6
CHD7Q9P2D1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD7Q9P2D1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 FAM58CP-201ENST00000435741 640 ntBASIC18.81■□□□□ 0.6
CHD7Q9P2D1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.81■□□□□ 0.6
CHD7Q9P2D1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 AC092919.2-201ENST00000623631 1645 ntBASIC18.81■□□□□ 0.6
CHD7Q9P2D1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms