Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.12■□□□□ 0.65
CXXC1Q9P0U4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 COX5BP2-201ENST00000392354 334 ntBASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 MRPL20P1-201ENST00000400819 433 ntBASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 RHOQP3-201ENST00000437982 621 ntBASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 AC074386.1-202ENST00000463561 864 ntBASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 OR7E47P-204ENST00000575924 449 ntBASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 AC004835.2-201ENST00000603762 682 ntBASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CXXC1Q9P0U4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 AL049757.1-201ENST00000616842 1596 ntBASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 AC109322.1-201ENST00000524499 1264 ntBASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 MIR4745-201ENST00000577608 62 ntBASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 AC092902.6-201ENST00000641783 218 ntBASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.1■□□□□ 0.65
CXXC1Q9P0U4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 AC105339.1-204ENST00000636249 355 ntBASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 AL805961.1-202ENST00000641562 540 ntBASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CXXC1Q9P0U4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXXC1Q9P0U4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.08■□□□□ 0.65
CXXC1Q9P0U4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC1Q9P0U4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC1Q9P0U4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC1Q9P0U4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.08■□□□□ 0.64
CXXC1Q9P0U4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms