Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 AC004951.3-201ENST00000418645 1148 ntBASIC17.37■□□□□ 0.37
NDE1Q9NXR1 AC004980.1-204ENST00000429707 299 ntBASIC17.37■□□□□ 0.37
NDE1Q9NXR1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 AC091390.4-202ENST00000476426 537 ntBASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 MCCD1P1-208ENST00000445732 328 ntBASIC17.36■□□□□ 0.37
NDE1Q9NXR1 KRT16P5-201ENST00000455284 522 ntBASIC17.36■□□□□ 0.37
NDE1Q9NXR1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 AL163051.1-201ENST00000569214 1512 ntBASIC17.36■□□□□ 0.37
NDE1Q9NXR1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDE1Q9NXR1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 AL596257.1-201ENST00000641463 2694 ntBASIC17.35■□□□□ 0.37
NDE1Q9NXR1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 CROCCP2-202ENST00000412962 2773 ntBASIC17.35■□□□□ 0.37
NDE1Q9NXR1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 PCDHA14-201ENST00000506751 2298 ntBASIC17.35■□□□□ 0.37
NDE1Q9NXR1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDE1Q9NXR1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDE1Q9NXR1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDE1Q9NXR1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms