Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 AC133963.1-201ENST00000504166 1679 ntBASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 AC018695.7-201ENST00000624587 2492 ntBASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2LQ9NUG4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 AC091390.4-202ENST00000476426 537 ntBASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 AC010203.1-204ENST00000548782 407 ntBASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 AC131212.4-201ENST00000623606 975 ntBASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2LQ9NUG4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 AC034236.2-201ENST00000606662 1610 ntBASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 UPK3BP1-201ENST00000428678 509 ntBASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2LQ9NUG4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms