Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 AC008403.3-201ENST00000598924 454 ntBASIC16.32■□□□□ 0.2
HMG20AQ9NP66 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.31■□□□□ 0.2
HMG20AQ9NP66 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 CROCCP2-202ENST00000412962 2773 ntBASIC16.31■□□□□ 0.2
HMG20AQ9NP66 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 LINC02199-201ENST00000506655 2702 ntBASIC16.31■□□□□ 0.2
HMG20AQ9NP66 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20AQ9NP66 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 AC106886.4-201ENST00000623557 2502 ntBASIC16.3■□□□□ 0.2
HMG20AQ9NP66 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 AC008556.1-201ENST00000610908 2040 ntBASIC16.3■□□□□ 0.2
HMG20AQ9NP66 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 RNA5SP413-201ENST00000516373 109 ntBASIC16.3■□□□□ 0.2
HMG20AQ9NP66 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 AP003097.1-201ENST00000530657 1135 ntBASIC16.3■□□□□ 0.2
HMG20AQ9NP66 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.3■□□□□ 0.2
HMG20AQ9NP66 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms