Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 PAWRP1-201ENST00000451083 565 ntBASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 SIGLEC30P-201ENST00000455569 941 ntBASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 GMCL1P1-201ENST00000463439 1581 ntBASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 AC025678.2-201ENST00000562061 970 ntBASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 AL805961.1-202ENST00000641562 540 ntBASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.34■□□□□ 0.85
ZFYVE28Q9HCC9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 AC007952.6-201ENST00000573168 2673 ntBASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 AC003957.1-201ENST00000625108 2673 ntBASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 AC132938.5-201ENST00000624980 1813 ntBASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 RHOQP3-201ENST00000437982 621 ntBASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 AL513210.1-201ENST00000629608 234 ntBASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 AC007064.4-201ENST00000637740 555 ntBASIC20.33■□□□□ 0.85
ZFYVE28Q9HCC9 AC148477.5-201ENST00000625164 1645 ntBASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 SIRPAP1-201ENST00000448467 1770 ntBASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZFYVE28Q9HCC9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms