Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22■■□□□ 1.11
UPF2Q9HAU5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC22■■□□□ 1.11
UPF2Q9HAU5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC22■■□□□ 1.11
UPF2Q9HAU5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22■■□□□ 1.11
UPF2Q9HAU5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
UPF2Q9HAU5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 AC006058.3-201ENST00000606217 1069 ntBASIC21.99■■□□□ 1.11
UPF2Q9HAU5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
UPF2Q9HAU5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 AC011676.5-201ENST00000624864 2660 ntBASIC21.98■■□□□ 1.11
UPF2Q9HAU5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 DUTP2-201ENST00000519164 463 ntBASIC21.98■■□□□ 1.11
UPF2Q9HAU5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 CROCCP2-202ENST00000412962 2773 ntBASIC21.98■■□□□ 1.11
UPF2Q9HAU5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
UPF2Q9HAU5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 HLA-L-209ENST00000420110 1011 ntBASIC21.97■■□□□ 1.11
UPF2Q9HAU5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms