Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 AC126763.1-201ENST00000552015 2118 ntBASIC18.44■□□□□ 0.54
BRD9Q9H8M2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD9Q9H8M2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 AC020763.4-201ENST00000623414 4170 ntBASIC18.43■□□□□ 0.54
BRD9Q9H8M2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.43■□□□□ 0.54
BRD9Q9H8M2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 MIR3687-2-201ENST00000577708 61 ntBASIC18.43■□□□□ 0.54
BRD9Q9H8M2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 MIR3687-1-201ENST00000614492 61 ntBASIC18.43■□□□□ 0.54
BRD9Q9H8M2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD9Q9H8M2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 AC004408.2-201ENST00000623613 2777 ntBASIC18.42■□□□□ 0.54
BRD9Q9H8M2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 AP002414.3-201ENST00000589352 1468 ntBASIC18.42■□□□□ 0.54
BRD9Q9H8M2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.42■□□□□ 0.54
BRD9Q9H8M2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 RNA5SP416-201ENST00000516838 111 ntBASIC18.42■□□□□ 0.54
BRD9Q9H8M2 UNC93B6-202ENST00000528242 690 ntBASIC18.42■□□□□ 0.54
BRD9Q9H8M2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 AC040169.1-201ENST00000565382 521 ntBASIC18.42■□□□□ 0.54
BRD9Q9H8M2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.42■□□□□ 0.54
BRD9Q9H8M2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BRD9Q9H8M2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms